Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm4535-201ENSMUST00000182274 558 ntBASIC16.45■□□□□ 0.22
Rfx8D3YU81 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Gm10355-201ENSMUST00000097146 517 ntBASIC16.45■□□□□ 0.22
Rfx8D3YU81 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rfx8D3YU81 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.44■□□□□ 0.22
Rfx8D3YU81 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Mir8098-201ENSMUST00000184011 137 ntBASIC16.44■□□□□ 0.22
Rfx8D3YU81 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Gm19164-201ENSMUST00000210667 640 ntBASIC16.44■□□□□ 0.22
Rfx8D3YU81 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rfx8D3YU81 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rfx8D3YU81 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.43■□□□□ 0.22
Rfx8D3YU81 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.43■□□□□ 0.22
Rfx8D3YU81 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Gm28659-201ENSMUST00000188013 759 ntBASIC16.43■□□□□ 0.22
Rfx8D3YU81 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.43■□□□□ 0.22
Rfx8D3YU81 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx8D3YU81 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rfx8D3YU81 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx8D3YU81 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms