Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Efs-202ENSMUST00000227037 2540 ntBASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm12887B1AVM1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Gm12441-201ENSMUST00000121806 588 ntBASIC12.59□□□□□ -0.39
Gm12887B1AVM1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm12887B1AVM1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.58□□□□□ -0.39
Gm12887B1AVM1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm12887B1AVM1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms