Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.08□□□□□ -0.32
Col6a4A2AX52 Gm27430-201ENSMUST00000184585 107 ntBASIC13.08□□□□□ -0.32
Col6a4A2AX52 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Gm44333-201ENSMUST00000197168 107 ntBASIC13.08□□□□□ -0.32
Col6a4A2AX52 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.07□□□□□ -0.32
Col6a4A2AX52 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.07□□□□□ -0.32
Col6a4A2AX52 Gm7653-201ENSMUST00000214567 508 ntBASIC13.07□□□□□ -0.32
Col6a4A2AX52 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Gm38294-201ENSMUST00000192831 381 ntBASIC13.07□□□□□ -0.32
Col6a4A2AX52 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Gm7774-201ENSMUST00000200064 533 ntBASIC13.07□□□□□ -0.32
Col6a4A2AX52 Thap2-203ENSMUST00000218989 527 ntBASIC13.07□□□□□ -0.32
Col6a4A2AX52 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a4A2AX52 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Gm18889-201ENSMUST00000174284 929 ntBASIC13.06□□□□□ -0.32
Col6a4A2AX52 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Col6a4A2AX52 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.06□□□□□ -0.32
Col6a4A2AX52 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col6a4A2AX52 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a4A2AX52 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms