Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Gm18056-201ENSMUST00000207670 568 ntBASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Gm18061-201ENSMUST00000208350 562 ntBASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Gm18063-201ENSMUST00000208529 568 ntBASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Gm18052-201ENSMUST00000208750 559 ntBASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom2A2ALU4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Gm27839-201ENSMUST00000184242 106 ntBASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Shroom2A2ALU4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Mir1897-201ENSMUST00000122581 272 ntBASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Gm44799-201ENSMUST00000207639 1202 ntBASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Gm16476-201ENSMUST00000221544 139 ntBASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shroom2A2ALU4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom2A2ALU4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Shroom2A2ALU4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Shroom2A2ALU4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Shroom2A2ALU4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC24.14■■□□□ 1.46
Shroom2A2ALU4 Gm7067-201ENSMUST00000207698 1249 ntBASIC24.14■■□□□ 1.46
Shroom2A2ALU4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Shroom2A2ALU4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Shroom2A2ALU4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
Shroom2A2ALU4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Shroom2A2ALU4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Shroom2A2ALU4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Shroom2A2ALU4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Shroom2A2ALU4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Gm7390-201ENSMUST00000212452 1216 ntBASIC24.13■■□□□ 1.45
Shroom2A2ALU4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC24.13■■□□□ 1.45
Shroom2A2ALU4 AC140451.2-201ENSMUST00000228030 664 ntBASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Gm16401-202ENSMUST00000197463 2074 ntBASIC24.13■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms