Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Gm13312-201ENSMUST00000119631 718 ntBASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Gm45328-201ENSMUST00000210942 917 ntBASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-1A0N8R1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-1A0N8R1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12-1A0N8R1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12-1A0N8R1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12-1A0N8R1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12-1A0N8R1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Gm11950-201ENSMUST00000121615 838 ntBASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-1A0N8R1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Gm14722-201ENSMUST00000118943 689 ntBASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Gm6345-202ENSMUST00000180900 204 ntBASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms