Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap99A0A140LIX9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.54■□□□□ 0.56
Cfap99A0A140LIX9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Mir8117-201ENSMUST00000184773 107 ntBASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap99A0A140LIX9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap99A0A140LIX9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap99A0A140LIX9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cfap99A0A140LIX9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.52■□□□□ 0.56
Cfap99A0A140LIX9 Gm26308-201ENSMUST00000157768 69 ntBASIC18.52■□□□□ 0.56
Cfap99A0A140LIX9 Mir6404-201ENSMUST00000183699 94 ntBASIC18.52■□□□□ 0.56
Cfap99A0A140LIX9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.52■□□□□ 0.56
Cfap99A0A140LIX9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap99A0A140LIX9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap99A0A140LIX9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap99A0A140LIX9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap99A0A140LIX9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap99A0A140LIX9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap99A0A140LIX9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.52■□□□□ 0.55
Cfap99A0A140LIX9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Cfap99A0A140LIX9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Gm11764-201ENSMUST00000120221 623 ntBASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Mir3113-201ENSMUST00000175478 76 ntBASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap99A0A140LIX9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms