Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm25406-201ENSMUST00000157599 105 ntBASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm27867-201ENSMUST00000184778 125 ntBASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm7367-201ENSMUST00000057611 492 ntBASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm15165-201ENSMUST00000118140 502 ntBASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms