Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.36□□□□□ -0.43
Trav17A0A075B655 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.35□□□□□ -0.43
Trav17A0A075B655 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav17A0A075B655 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.34□□□□□ -0.43
Trav17A0A075B655 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.34□□□□□ -0.43
Trav17A0A075B655 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Mir6404-201ENSMUST00000183699 94 ntBASIC12.34□□□□□ -0.43
Trav17A0A075B655 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.34□□□□□ -0.43
Trav17A0A075B655 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.34□□□□□ -0.43
Trav17A0A075B655 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.34□□□□□ -0.43
Trav17A0A075B655 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav17A0A075B655 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav17A0A075B655 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav17A0A075B655 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav17A0A075B655 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.33□□□□□ -0.44
Trav17A0A075B655 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.33□□□□□ -0.44
Trav17A0A075B655 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms