Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Gm13418-201ENSMUST00000119097 944 ntBASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Gm6443-201ENSMUST00000203599 874 ntBASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Gm10060-201ENSMUST00000212002 111 ntBASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Gm8655-201ENSMUST00000221159 852 ntBASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13-1A0A075B644 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Mir6404-201ENSMUST00000183699 94 ntBASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Gm43514-201ENSMUST00000198852 424 ntBASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13-1A0A075B644 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms