Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm11355-201ENSMUST00000121120 306 ntBASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm21559-201ENSMUST00000220638 855 ntBASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm8587-201ENSMUST00000076538 843 ntBASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms