Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm12933-201ENSMUST00000120203 872 ntBASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm27275-201ENSMUST00000184318 272 ntBASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav16d-dv11A0A075B617 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm7791-201ENSMUST00000219066 539 ntBASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav16d-dv11A0A075B617 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms