Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-1A0A075B606 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Gm8097-201ENSMUST00000117903 829 ntBASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13d-1A0A075B606 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Gm13418-201ENSMUST00000119097 944 ntBASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Gm15173-201ENSMUST00000122049 433 ntBASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Gm25406-201ENSMUST00000157599 105 ntBASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Gm18206-201ENSMUST00000207027 926 ntBASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-1A0A075B606 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13d-1A0A075B606 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13d-1A0A075B606 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13d-1A0A075B606 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav13d-1A0A075B606 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13d-1A0A075B606 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Gm8655-201ENSMUST00000221159 852 ntBASIC11.39□□□□□ -0.59
Trav13d-1A0A075B606 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms