Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Hcfc2Q9D968 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcfc2Q9D968 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hcfc2Q9D968 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc2Q9D968 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.22■□□□□ 0.35
Hcfc2Q9D968 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc2Q9D968 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.22■□□□□ 0.35
Hcfc2Q9D968 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hcfc2Q9D968 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc2Q9D968 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc2Q9D968 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.21■□□□□ 0.35
Hcfc2Q9D968 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.21■□□□□ 0.35
Hcfc2Q9D968 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc2Q9D968 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.21■□□□□ 0.35
Hcfc2Q9D968 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hcfc2Q9D968 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc2Q9D968 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Hcfc2Q9D968 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcfc2Q9D968 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcfc2Q9D968 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hcfc2Q9D968 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc2Q9D968 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc2Q9D968 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hcfc2Q9D968 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc2Q9D968 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Hcfc2Q9D968 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.18■□□□□ 0.34
Hcfc2Q9D968 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc2Q9D968 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hcfc2Q9D968 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc2Q9D968 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc2Q9D968 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc2Q9D968 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc2Q9D968 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hcfc2Q9D968 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc2Q9D968 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.17■□□□□ 0.34
Hcfc2Q9D968 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.17■□□□□ 0.34
Hcfc2Q9D968 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hcfc2Q9D968 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc2Q9D968 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc2Q9D968 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc2Q9D968 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc2Q9D968 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hcfc2Q9D968 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.16■□□□□ 0.34
Hcfc2Q9D968 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc2Q9D968 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc2Q9D968 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.15■□□□□ 0.34
Hcfc2Q9D968 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc2Q9D968 Particl-201ENSMUST00000205370 1560 ntBASIC17.15■□□□□ 0.34
Hcfc2Q9D968 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.14■□□□□ 0.33
Hcfc2Q9D968 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.14■□□□□ 0.33
Hcfc2Q9D968 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc2Q9D968 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.14■□□□□ 0.33
Hcfc2Q9D968 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc2Q9D968 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc2Q9D968 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Hcfc2Q9D968 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc2Q9D968 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc2Q9D968 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc2Q9D968 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc2Q9D968 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc2Q9D968 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc2Q9D968 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc2Q9D968 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.12■□□□□ 0.33
Hcfc2Q9D968 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hcfc2Q9D968 Zfp131-205ENSMUST00000223812 663 ntBASIC17.12■□□□□ 0.33
Hcfc2Q9D968 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc2Q9D968 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc2Q9D968 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc2Q9D968 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc2Q9D968 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.11■□□□□ 0.33
Hcfc2Q9D968 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc2Q9D968 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Hcfc2Q9D968 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.1■□□□□ 0.33
Hcfc2Q9D968 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc2Q9D968 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Hcfc2Q9D968 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.1■□□□□ 0.33
Hcfc2Q9D968 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hcfc2Q9D968 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Hcfc2Q9D968 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc2Q9D968 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc2Q9D968 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc2Q9D968 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcfc2Q9D968 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcfc2Q9D968 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcfc2Q9D968 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.08■□□□□ 0.32
Hcfc2Q9D968 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcfc2Q9D968 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc2Q9D968 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc2Q9D968 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc2Q9D968 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc2Q9D968 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc2Q9D968 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Hcfc2Q9D968 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc2Q9D968 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc2Q9D968 Gm24970-201ENSMUST00000175582 82 ntBASIC17.06■□□□□ 0.32
Hcfc2Q9D968 Gm30023-201ENSMUST00000197970 889 ntBASIC17.06■□□□□ 0.32
Hcfc2Q9D968 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc2Q9D968 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc2Q9D968 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc2Q9D968 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms