Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.58■■□□□ 1.21
Pcdhb3Q91XZ7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb3Q91XZ7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhb3Q91XZ7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb3Q91XZ7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.57■■□□□ 1.2
Pcdhb3Q91XZ7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb3Q91XZ7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb3Q91XZ7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
Pcdhb3Q91XZ7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb3Q91XZ7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb3Q91XZ7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb3Q91XZ7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb3Q91XZ7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb3Q91XZ7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb3Q91XZ7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb3Q91XZ7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb3Q91XZ7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Pcdhb3Q91XZ7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb3Q91XZ7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb3Q91XZ7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb3Q91XZ7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb3Q91XZ7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb3Q91XZ7 Gm8503-201ENSMUST00000118131 455 ntBASIC22.53■■□□□ 1.2
Pcdhb3Q91XZ7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.53■■□□□ 1.2
Pcdhb3Q91XZ7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb3Q91XZ7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb3Q91XZ7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb3Q91XZ7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb3Q91XZ7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb3Q91XZ7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.52■■□□□ 1.2
Pcdhb3Q91XZ7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Pcdhb3Q91XZ7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Pcdhb3Q91XZ7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb3Q91XZ7 Notumos-201ENSMUST00000151998 2659 ntBASIC22.52■■□□□ 1.2
Pcdhb3Q91XZ7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb3Q91XZ7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb3Q91XZ7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb3Q91XZ7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb3Q91XZ7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb3Q91XZ7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.5■■□□□ 1.19
Pcdhb3Q91XZ7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb3Q91XZ7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb3Q91XZ7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb3Q91XZ7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb3Q91XZ7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb3Q91XZ7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb3Q91XZ7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb3Q91XZ7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb3Q91XZ7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb3Q91XZ7 Gm6821-201ENSMUST00000107540 542 ntBASIC22.48■■□□□ 1.19
Pcdhb3Q91XZ7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb3Q91XZ7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb3Q91XZ7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
Pcdhb3Q91XZ7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Pcdhb3Q91XZ7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb3Q91XZ7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb3Q91XZ7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb3Q91XZ7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
Pcdhb3Q91XZ7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.44■■□□□ 1.18
Pcdhb3Q91XZ7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb3Q91XZ7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb3Q91XZ7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb3Q91XZ7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb3Q91XZ7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb3Q91XZ7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb3Q91XZ7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb3Q91XZ7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb3Q91XZ7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb3Q91XZ7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb3Q91XZ7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhb3Q91XZ7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb3Q91XZ7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb3Q91XZ7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb3Q91XZ7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb3Q91XZ7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb3Q91XZ7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb3Q91XZ7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb3Q91XZ7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Pcdhb3Q91XZ7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.39■■□□□ 1.17
Pcdhb3Q91XZ7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Pcdhb3Q91XZ7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.39■■□□□ 1.17
Pcdhb3Q91XZ7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb3Q91XZ7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb3Q91XZ7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb3Q91XZ7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.39■■□□□ 1.17
Pcdhb3Q91XZ7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb3Q91XZ7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb3Q91XZ7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb3Q91XZ7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb3Q91XZ7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhb3Q91XZ7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb3Q91XZ7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhb3Q91XZ7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb3Q91XZ7 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.37■■□□□ 1.17
Pcdhb3Q91XZ7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhb3Q91XZ7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb3Q91XZ7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb3Q91XZ7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb3Q91XZ7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb3Q91XZ7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms