Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rpp40Q8R1F9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rpp40Q8R1F9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rpp40Q8R1F9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rpp40Q8R1F9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Rpp40Q8R1F9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rpp40Q8R1F9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpp40Q8R1F9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpp40Q8R1F9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.54■■□□□ 1.52
Rpp40Q8R1F9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rpp40Q8R1F9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rpp40Q8R1F9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Rpp40Q8R1F9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpp40Q8R1F9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpp40Q8R1F9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rpp40Q8R1F9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rpp40Q8R1F9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rpp40Q8R1F9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.52■■□□□ 1.52
Rpp40Q8R1F9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rpp40Q8R1F9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rpp40Q8R1F9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rpp40Q8R1F9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Rpp40Q8R1F9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpp40Q8R1F9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Rpp40Q8R1F9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpp40Q8R1F9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.51■■□□□ 1.51
Rpp40Q8R1F9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.51■■□□□ 1.51
Rpp40Q8R1F9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpp40Q8R1F9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Rpp40Q8R1F9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpp40Q8R1F9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpp40Q8R1F9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpp40Q8R1F9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpp40Q8R1F9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Rpp40Q8R1F9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rpp40Q8R1F9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rpp40Q8R1F9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Rpp40Q8R1F9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.47■■□□□ 1.51
Rpp40Q8R1F9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpp40Q8R1F9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Rpp40Q8R1F9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Rpp40Q8R1F9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rpp40Q8R1F9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Rpp40Q8R1F9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Rpp40Q8R1F9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.45■■□□□ 1.5
Rpp40Q8R1F9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.45■■□□□ 1.5
Rpp40Q8R1F9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rpp40Q8R1F9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rpp40Q8R1F9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.45■■□□□ 1.5
Rpp40Q8R1F9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Rpp40Q8R1F9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpp40Q8R1F9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpp40Q8R1F9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpp40Q8R1F9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rpp40Q8R1F9 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.43■■□□□ 1.5
Rpp40Q8R1F9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.42■■□□□ 1.5
Rpp40Q8R1F9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.42■■□□□ 1.5
Rpp40Q8R1F9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
Rpp40Q8R1F9 Gm27502-201ENSMUST00000183495 199 ntBASIC24.41■■□□□ 1.5
Rpp40Q8R1F9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.4■■□□□ 1.5
Rpp40Q8R1F9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.4■■□□□ 1.5
Rpp40Q8R1F9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpp40Q8R1F9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.4■■□□□ 1.5
Rpp40Q8R1F9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpp40Q8R1F9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpp40Q8R1F9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpp40Q8R1F9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rpp40Q8R1F9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rpp40Q8R1F9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rpp40Q8R1F9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rpp40Q8R1F9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rpp40Q8R1F9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rpp40Q8R1F9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Rpp40Q8R1F9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.38■■□□□ 1.49
Rpp40Q8R1F9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rpp40Q8R1F9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rpp40Q8R1F9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rpp40Q8R1F9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.37■■□□□ 1.49
Rpp40Q8R1F9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rpp40Q8R1F9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rpp40Q8R1F9 Cap2-205ENSMUST00000225824 1634 ntBASIC24.36■■□□□ 1.49
Rpp40Q8R1F9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.36■■□□□ 1.49
Rpp40Q8R1F9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpp40Q8R1F9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpp40Q8R1F9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rpp40Q8R1F9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rpp40Q8R1F9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rpp40Q8R1F9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.33■■□□□ 1.49
Rpp40Q8R1F9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rpp40Q8R1F9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rpp40Q8R1F9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.33■■□□□ 1.49
Rpp40Q8R1F9 Gm12366-201ENSMUST00000121722 873 ntBASIC24.33■■□□□ 1.49
Rpp40Q8R1F9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.33■■□□□ 1.49
Rpp40Q8R1F9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.33■■□□□ 1.49
Rpp40Q8R1F9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.33■■□□□ 1.49
Rpp40Q8R1F9 Gm5786-201ENSMUST00000085368 882 ntBASIC24.33■■□□□ 1.49
Rpp40Q8R1F9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rpp40Q8R1F9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
Rpp40Q8R1F9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rpp40Q8R1F9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 123.7 ms