Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Sf3a1Q8K4Z5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Sf3a1Q8K4Z5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Sf3a1Q8K4Z5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Sf3a1Q8K4Z5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
Sf3a1Q8K4Z5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.8■■■□□ 2.04
Sf3a1Q8K4Z5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Sf3a1Q8K4Z5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Sf3a1Q8K4Z5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Sf3a1Q8K4Z5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.79■■■□□ 2.04
Sf3a1Q8K4Z5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sf3a1Q8K4Z5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sf3a1Q8K4Z5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sf3a1Q8K4Z5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
Sf3a1Q8K4Z5 AC153911.1-201ENSMUST00000220378 758 ntBASIC27.78■■■□□ 2.04
Sf3a1Q8K4Z5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sf3a1Q8K4Z5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
Sf3a1Q8K4Z5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Sf3a1Q8K4Z5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.76■■■□□ 2.03
Sf3a1Q8K4Z5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Sf3a1Q8K4Z5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Sf3a1Q8K4Z5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Sf3a1Q8K4Z5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Sf3a1Q8K4Z5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Sf3a1Q8K4Z5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.74■■■□□ 2.03
Sf3a1Q8K4Z5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sf3a1Q8K4Z5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Sf3a1Q8K4Z5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sf3a1Q8K4Z5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sf3a1Q8K4Z5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sf3a1Q8K4Z5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sf3a1Q8K4Z5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sf3a1Q8K4Z5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sf3a1Q8K4Z5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC27.72■■■□□ 2.03
Sf3a1Q8K4Z5 Scarna2-201ENSMUST00000157560 414 ntBASIC27.72■■■□□ 2.03
Sf3a1Q8K4Z5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Sf3a1Q8K4Z5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Sf3a1Q8K4Z5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Sf3a1Q8K4Z5 Gm11175-201ENSMUST00000116172 543 ntBASIC27.71■■■□□ 2.03
Sf3a1Q8K4Z5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sf3a1Q8K4Z5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.71■■■□□ 2.03
Sf3a1Q8K4Z5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sf3a1Q8K4Z5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Sf3a1Q8K4Z5 Terc-201ENSMUST00000082862 423 ntBASIC27.7■■■□□ 2.02
Sf3a1Q8K4Z5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Sf3a1Q8K4Z5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Sf3a1Q8K4Z5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Sf3a1Q8K4Z5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Sf3a1Q8K4Z5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Sf3a1Q8K4Z5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Sf3a1Q8K4Z5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Sf3a1Q8K4Z5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Sf3a1Q8K4Z5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sf3a1Q8K4Z5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sf3a1Q8K4Z5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sf3a1Q8K4Z5 Gm9806-201ENSMUST00000051080 552 ntBASIC27.67■■■□□ 2.02
Sf3a1Q8K4Z5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Sf3a1Q8K4Z5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sf3a1Q8K4Z5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Sf3a1Q8K4Z5 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.66■■■□□ 2.02
Sf3a1Q8K4Z5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.65■■■□□ 2.02
Sf3a1Q8K4Z5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Sf3a1Q8K4Z5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
Sf3a1Q8K4Z5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
Sf3a1Q8K4Z5 Gm16437-201ENSMUST00000025669 507 ntBASIC27.64■■■□□ 2.02
Sf3a1Q8K4Z5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Sf3a1Q8K4Z5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Sf3a1Q8K4Z5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Sf3a1Q8K4Z5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.63■■■□□ 2.01
Sf3a1Q8K4Z5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sf3a1Q8K4Z5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sf3a1Q8K4Z5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sf3a1Q8K4Z5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sf3a1Q8K4Z5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Sf3a1Q8K4Z5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.61■■■□□ 2.01
Sf3a1Q8K4Z5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.61■■■□□ 2.01
Sf3a1Q8K4Z5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Sf3a1Q8K4Z5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Sf3a1Q8K4Z5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Sf3a1Q8K4Z5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
Sf3a1Q8K4Z5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Sf3a1Q8K4Z5 Gm11687-201ENSMUST00000118911 886 ntBASIC27.59■■■□□ 2.01
Sf3a1Q8K4Z5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Sf3a1Q8K4Z5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Sf3a1Q8K4Z5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Sf3a1Q8K4Z5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC27.58■■■□□ 2.01
Sf3a1Q8K4Z5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.57■■■□□ 2
Sf3a1Q8K4Z5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.56■■■□□ 2
Sf3a1Q8K4Z5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.56■■■□□ 2
Sf3a1Q8K4Z5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.56■■■□□ 2
Sf3a1Q8K4Z5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Sf3a1Q8K4Z5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Sf3a1Q8K4Z5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.55■■■□□ 2
Sf3a1Q8K4Z5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Sf3a1Q8K4Z5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Sf3a1Q8K4Z5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Sf3a1Q8K4Z5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC27.55■■■□□ 2
Sf3a1Q8K4Z5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.55■■■□□ 2
Sf3a1Q8K4Z5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.55■■■□□ 2
Sf3a1Q8K4Z5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.54■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms