Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ptcd1Q8C2E4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC28.34■■■□□ 2.13
Ptcd1Q8C2E4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ptcd1Q8C2E4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Ptcd1Q8C2E4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Ptcd1Q8C2E4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ptcd1Q8C2E4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
Ptcd1Q8C2E4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ptcd1Q8C2E4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ptcd1Q8C2E4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
Ptcd1Q8C2E4 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.3■■■□□ 2.12
Ptcd1Q8C2E4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Ptcd1Q8C2E4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Ptcd1Q8C2E4 Terc-201ENSMUST00000082862 423 ntBASIC28.27■■■□□ 2.12
Ptcd1Q8C2E4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
Ptcd1Q8C2E4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Ptcd1Q8C2E4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Ptcd1Q8C2E4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.26■■■□□ 2.11
Ptcd1Q8C2E4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Ptcd1Q8C2E4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ptcd1Q8C2E4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ptcd1Q8C2E4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Ptcd1Q8C2E4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC28.25■■■□□ 2.11
Ptcd1Q8C2E4 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.25■■■□□ 2.11
Ptcd1Q8C2E4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Ptcd1Q8C2E4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC28.24■■■□□ 2.11
Ptcd1Q8C2E4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ptcd1Q8C2E4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Ptcd1Q8C2E4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Ptcd1Q8C2E4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ptcd1Q8C2E4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ptcd1Q8C2E4 Rps24-207ENSMUST00000224568 714 ntBASIC28.21■■■□□ 2.11
Ptcd1Q8C2E4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.2■■■□□ 2.11
Ptcd1Q8C2E4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Ptcd1Q8C2E4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.2■■■□□ 2.1
Ptcd1Q8C2E4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ptcd1Q8C2E4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
Ptcd1Q8C2E4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Ptcd1Q8C2E4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ptcd1Q8C2E4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Ptcd1Q8C2E4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Ptcd1Q8C2E4 Gm15820-201ENSMUST00000201566 728 ntBASIC28.18■■■□□ 2.1
Ptcd1Q8C2E4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ptcd1Q8C2E4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Ptcd1Q8C2E4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC28.17■■■□□ 2.1
Ptcd1Q8C2E4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
Ptcd1Q8C2E4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Ptcd1Q8C2E4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.16■■■□□ 2.1
Ptcd1Q8C2E4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ptcd1Q8C2E4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ptcd1Q8C2E4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC28.15■■■□□ 2.1
Ptcd1Q8C2E4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ptcd1Q8C2E4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Ptcd1Q8C2E4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Ptcd1Q8C2E4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptcd1Q8C2E4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
Ptcd1Q8C2E4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Ptcd1Q8C2E4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptcd1Q8C2E4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Ptcd1Q8C2E4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Ptcd1Q8C2E4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.12■■■□□ 2.09
Ptcd1Q8C2E4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Ptcd1Q8C2E4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ptcd1Q8C2E4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ptcd1Q8C2E4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.1■■■□□ 2.09
Ptcd1Q8C2E4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ptcd1Q8C2E4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Ptcd1Q8C2E4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC28.09■■■□□ 2.09
Ptcd1Q8C2E4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Ptcd1Q8C2E4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
Ptcd1Q8C2E4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
Ptcd1Q8C2E4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Ptcd1Q8C2E4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.07■■■□□ 2.08
Ptcd1Q8C2E4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ptcd1Q8C2E4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ptcd1Q8C2E4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Ptcd1Q8C2E4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ptcd1Q8C2E4 Gm13238-201ENSMUST00000117655 780 ntBASIC28.05■■■□□ 2.08
Ptcd1Q8C2E4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC28.05■■■□□ 2.08
Ptcd1Q8C2E4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ptcd1Q8C2E4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ptcd1Q8C2E4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
Ptcd1Q8C2E4 Gm44428-201ENSMUST00000204474 874 ntBASIC28.04■■■□□ 2.08
Ptcd1Q8C2E4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ptcd1Q8C2E4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Ptcd1Q8C2E4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.03■■■□□ 2.08
Ptcd1Q8C2E4 Gm45102-201ENSMUST00000207427 857 ntBASIC28.03■■■□□ 2.08
Ptcd1Q8C2E4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Ptcd1Q8C2E4 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.02■■■□□ 2.08
Ptcd1Q8C2E4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Ptcd1Q8C2E4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Ptcd1Q8C2E4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ptcd1Q8C2E4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ptcd1Q8C2E4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ptcd1Q8C2E4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ptcd1Q8C2E4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.01■■■□□ 2.07
Ptcd1Q8C2E4 Gm43566-201ENSMUST00000196851 808 ntBASIC28.01■■■□□ 2.07
Ptcd1Q8C2E4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ptcd1Q8C2E4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
Ptcd1Q8C2E4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms