Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrtm1Q8BXQ3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrtm1Q8BXQ3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrtm1Q8BXQ3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrtm1Q8BXQ3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.9■□□□□ 0.78
Lrtm1Q8BXQ3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lrtm1Q8BXQ3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lrtm1Q8BXQ3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lrtm1Q8BXQ3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrtm1Q8BXQ3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrtm1Q8BXQ3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrtm1Q8BXQ3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lrtm1Q8BXQ3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrtm1Q8BXQ3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrtm1Q8BXQ3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.88■□□□□ 0.77
Lrtm1Q8BXQ3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrtm1Q8BXQ3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrtm1Q8BXQ3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.87■□□□□ 0.77
Lrtm1Q8BXQ3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrtm1Q8BXQ3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrtm1Q8BXQ3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrtm1Q8BXQ3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrtm1Q8BXQ3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lrtm1Q8BXQ3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Lrtm1Q8BXQ3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrtm1Q8BXQ3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrtm1Q8BXQ3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lrtm1Q8BXQ3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrtm1Q8BXQ3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.83■□□□□ 0.77
Lrtm1Q8BXQ3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lrtm1Q8BXQ3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lrtm1Q8BXQ3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Lrtm1Q8BXQ3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrtm1Q8BXQ3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrtm1Q8BXQ3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrtm1Q8BXQ3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Lrtm1Q8BXQ3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrtm1Q8BXQ3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrtm1Q8BXQ3 Scarna2-201ENSMUST00000157560 414 ntBASIC19.82■□□□□ 0.76
Lrtm1Q8BXQ3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrtm1Q8BXQ3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrtm1Q8BXQ3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrtm1Q8BXQ3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.82■□□□□ 0.76
Lrtm1Q8BXQ3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrtm1Q8BXQ3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lrtm1Q8BXQ3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.81■□□□□ 0.76
Lrtm1Q8BXQ3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrtm1Q8BXQ3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
Lrtm1Q8BXQ3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrtm1Q8BXQ3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrtm1Q8BXQ3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrtm1Q8BXQ3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Lrtm1Q8BXQ3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrtm1Q8BXQ3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lrtm1Q8BXQ3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrtm1Q8BXQ3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.77■□□□□ 0.76
Lrtm1Q8BXQ3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lrtm1Q8BXQ3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lrtm1Q8BXQ3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrtm1Q8BXQ3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lrtm1Q8BXQ3 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.76■□□□□ 0.75
Lrtm1Q8BXQ3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lrtm1Q8BXQ3 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.76■□□□□ 0.75
Lrtm1Q8BXQ3 Gm16437-201ENSMUST00000025669 507 ntBASIC19.76■□□□□ 0.75
Lrtm1Q8BXQ3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lrtm1Q8BXQ3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lrtm1Q8BXQ3 Terc-201ENSMUST00000082862 423 ntBASIC19.75■□□□□ 0.75
Lrtm1Q8BXQ3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lrtm1Q8BXQ3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrtm1Q8BXQ3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrtm1Q8BXQ3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrtm1Q8BXQ3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrtm1Q8BXQ3 Gm9806-201ENSMUST00000051080 552 ntBASIC19.74■□□□□ 0.75
Lrtm1Q8BXQ3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lrtm1Q8BXQ3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.73■□□□□ 0.75
Lrtm1Q8BXQ3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lrtm1Q8BXQ3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lrtm1Q8BXQ3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.73■□□□□ 0.75
Lrtm1Q8BXQ3 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.73■□□□□ 0.75
Lrtm1Q8BXQ3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lrtm1Q8BXQ3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrtm1Q8BXQ3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrtm1Q8BXQ3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lrtm1Q8BXQ3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lrtm1Q8BXQ3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Lrtm1Q8BXQ3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrtm1Q8BXQ3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrtm1Q8BXQ3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Lrtm1Q8BXQ3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrtm1Q8BXQ3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrtm1Q8BXQ3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrtm1Q8BXQ3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrtm1Q8BXQ3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrtm1Q8BXQ3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lrtm1Q8BXQ3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrtm1Q8BXQ3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrtm1Q8BXQ3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lrtm1Q8BXQ3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.68■□□□□ 0.74
Lrtm1Q8BXQ3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.68■□□□□ 0.74
Lrtm1Q8BXQ3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms