Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Samm50Q8BGH2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Samm50Q8BGH2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Samm50Q8BGH2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.45■■□□□ 1.82
Samm50Q8BGH2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Samm50Q8BGH2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Samm50Q8BGH2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Samm50Q8BGH2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Samm50Q8BGH2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Samm50Q8BGH2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Samm50Q8BGH2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Samm50Q8BGH2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Samm50Q8BGH2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.42■■□□□ 1.82
Samm50Q8BGH2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Samm50Q8BGH2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Samm50Q8BGH2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Samm50Q8BGH2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Samm50Q8BGH2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Samm50Q8BGH2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Samm50Q8BGH2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Samm50Q8BGH2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
Samm50Q8BGH2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Samm50Q8BGH2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Samm50Q8BGH2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Samm50Q8BGH2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Samm50Q8BGH2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.39■■□□□ 1.81
Samm50Q8BGH2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Samm50Q8BGH2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Samm50Q8BGH2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Samm50Q8BGH2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Samm50Q8BGH2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Samm50Q8BGH2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Samm50Q8BGH2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Samm50Q8BGH2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Samm50Q8BGH2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Samm50Q8BGH2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Samm50Q8BGH2 Gm17641-201ENSMUST00000166328 2350 ntBASIC26.36■■□□□ 1.81
Samm50Q8BGH2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Samm50Q8BGH2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Samm50Q8BGH2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Samm50Q8BGH2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Samm50Q8BGH2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Samm50Q8BGH2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Samm50Q8BGH2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Samm50Q8BGH2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Samm50Q8BGH2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Samm50Q8BGH2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Samm50Q8BGH2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Samm50Q8BGH2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Samm50Q8BGH2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Samm50Q8BGH2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Samm50Q8BGH2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.8
Samm50Q8BGH2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Samm50Q8BGH2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Samm50Q8BGH2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.32■■□□□ 1.8
Samm50Q8BGH2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Samm50Q8BGH2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Samm50Q8BGH2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.31■■□□□ 1.8
Samm50Q8BGH2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Samm50Q8BGH2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Samm50Q8BGH2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Samm50Q8BGH2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Samm50Q8BGH2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Samm50Q8BGH2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Samm50Q8BGH2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Samm50Q8BGH2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
Samm50Q8BGH2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Samm50Q8BGH2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Samm50Q8BGH2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC26.29■■□□□ 1.8
Samm50Q8BGH2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Samm50Q8BGH2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Samm50Q8BGH2 Gm37136-201ENSMUST00000194368 194 ntBASIC26.27■■□□□ 1.8
Samm50Q8BGH2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.27■■□□□ 1.8
Samm50Q8BGH2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Samm50Q8BGH2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Samm50Q8BGH2 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.26■■□□□ 1.79
Samm50Q8BGH2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Samm50Q8BGH2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Samm50Q8BGH2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Samm50Q8BGH2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Samm50Q8BGH2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Samm50Q8BGH2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Samm50Q8BGH2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.24■■□□□ 1.79
Samm50Q8BGH2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Samm50Q8BGH2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Samm50Q8BGH2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Samm50Q8BGH2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Samm50Q8BGH2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Samm50Q8BGH2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Samm50Q8BGH2 Gm6311-201ENSMUST00000073790 878 ntBASIC26.23■■□□□ 1.79
Samm50Q8BGH2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Samm50Q8BGH2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Samm50Q8BGH2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Samm50Q8BGH2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Samm50Q8BGH2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Samm50Q8BGH2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.22■■□□□ 1.79
Samm50Q8BGH2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Samm50Q8BGH2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Samm50Q8BGH2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Samm50Q8BGH2 Gm4799-201ENSMUST00000095396 657 ntBASIC26.21■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 119.5 ms