Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.96■□□□□ 0.95
Exosc3Q7TQK4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Exosc3Q7TQK4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.95■□□□□ 0.94
Exosc3Q7TQK4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Exosc3Q7TQK4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.94■□□□□ 0.94
Exosc3Q7TQK4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.94■□□□□ 0.94
Exosc3Q7TQK4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Exosc3Q7TQK4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Exosc3Q7TQK4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Exosc3Q7TQK4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Exosc3Q7TQK4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Exosc3Q7TQK4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Exosc3Q7TQK4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Exosc3Q7TQK4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Exosc3Q7TQK4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Exosc3Q7TQK4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Exosc3Q7TQK4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Exosc3Q7TQK4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Exosc3Q7TQK4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.91■□□□□ 0.94
Exosc3Q7TQK4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.91■□□□□ 0.94
Exosc3Q7TQK4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Exosc3Q7TQK4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Exosc3Q7TQK4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Exosc3Q7TQK4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Exosc3Q7TQK4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
Exosc3Q7TQK4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Exosc3Q7TQK4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Exosc3Q7TQK4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Exosc3Q7TQK4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.89■□□□□ 0.93
Exosc3Q7TQK4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Exosc3Q7TQK4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Exosc3Q7TQK4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Exosc3Q7TQK4 Terc-201ENSMUST00000082862 423 ntBASIC20.89■□□□□ 0.93
Exosc3Q7TQK4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Exosc3Q7TQK4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Exosc3Q7TQK4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Exosc3Q7TQK4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Exosc3Q7TQK4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Exosc3Q7TQK4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Exosc3Q7TQK4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Exosc3Q7TQK4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Exosc3Q7TQK4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Exosc3Q7TQK4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Exosc3Q7TQK4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Exosc3Q7TQK4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Exosc3Q7TQK4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Exosc3Q7TQK4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.84■□□□□ 0.93
Exosc3Q7TQK4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Exosc3Q7TQK4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Exosc3Q7TQK4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Exosc3Q7TQK4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Exosc3Q7TQK4 Scarna2-201ENSMUST00000157560 414 ntBASIC20.83■□□□□ 0.93
Exosc3Q7TQK4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Exosc3Q7TQK4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Exosc3Q7TQK4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Exosc3Q7TQK4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Exosc3Q7TQK4 Gm9806-201ENSMUST00000051080 552 ntBASIC20.82■□□□□ 0.92
Exosc3Q7TQK4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Exosc3Q7TQK4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Exosc3Q7TQK4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Exosc3Q7TQK4 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.8■□□□□ 0.92
Exosc3Q7TQK4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Exosc3Q7TQK4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Exosc3Q7TQK4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Exosc3Q7TQK4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Exosc3Q7TQK4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Exosc3Q7TQK4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Exosc3Q7TQK4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Exosc3Q7TQK4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Exosc3Q7TQK4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Exosc3Q7TQK4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Exosc3Q7TQK4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Exosc3Q7TQK4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Exosc3Q7TQK4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Exosc3Q7TQK4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Exosc3Q7TQK4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Exosc3Q7TQK4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Exosc3Q7TQK4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Exosc3Q7TQK4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.76■□□□□ 0.91
Exosc3Q7TQK4 Gm11687-201ENSMUST00000118911 886 ntBASIC20.76■□□□□ 0.91
Exosc3Q7TQK4 Gm16437-201ENSMUST00000025669 507 ntBASIC20.76■□□□□ 0.91
Exosc3Q7TQK4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Exosc3Q7TQK4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Exosc3Q7TQK4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.76■□□□□ 0.91
Exosc3Q7TQK4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Exosc3Q7TQK4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Exosc3Q7TQK4 Gm11175-201ENSMUST00000116172 543 ntBASIC20.75■□□□□ 0.91
Exosc3Q7TQK4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Exosc3Q7TQK4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Exosc3Q7TQK4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms