Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rfx4Q7TNK1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfx4Q7TNK1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rfx4Q7TNK1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfx4Q7TNK1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfx4Q7TNK1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rfx4Q7TNK1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfx4Q7TNK1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx4Q7TNK1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx4Q7TNK1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx4Q7TNK1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx4Q7TNK1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Rfx4Q7TNK1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rfx4Q7TNK1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Rfx4Q7TNK1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Rfx4Q7TNK1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx4Q7TNK1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx4Q7TNK1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfx4Q7TNK1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx4Q7TNK1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx4Q7TNK1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx4Q7TNK1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx4Q7TNK1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx4Q7TNK1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx4Q7TNK1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx4Q7TNK1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx4Q7TNK1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx4Q7TNK1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms