Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav2Q5R1I9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav2Q5R1I9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav2Q5R1I9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav2Q5R1I9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav2Q5R1I9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav2Q5R1I9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav2Q5R1I9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav2Q5R1I9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav2Q5R1I9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav2Q5R1I9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.09■□□□□ 0.49
Trav2Q5R1I9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav2Q5R1I9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav2Q5R1I9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav2Q5R1I9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trav2Q5R1I9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav2Q5R1I9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav2Q5R1I9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav2Q5R1I9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav2Q5R1I9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav2Q5R1I9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav2Q5R1I9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav2Q5R1I9 Gm27502-201ENSMUST00000183495 199 ntBASIC18.07■□□□□ 0.48
Trav2Q5R1I9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav2Q5R1I9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav2Q5R1I9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav2Q5R1I9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav2Q5R1I9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav2Q5R1I9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav2Q5R1I9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav2Q5R1I9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav2Q5R1I9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav2Q5R1I9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav2Q5R1I9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav2Q5R1I9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav2Q5R1I9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav2Q5R1I9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.05■□□□□ 0.48
Trav2Q5R1I9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.05■□□□□ 0.48
Trav2Q5R1I9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav2Q5R1I9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav2Q5R1I9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav2Q5R1I9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav2Q5R1I9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav2Q5R1I9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav2Q5R1I9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav2Q5R1I9 Gm7332-201ENSMUST00000118351 454 ntBASIC18.03■□□□□ 0.48
Trav2Q5R1I9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav2Q5R1I9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Trav2Q5R1I9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav2Q5R1I9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav2Q5R1I9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav2Q5R1I9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Trav2Q5R1I9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav2Q5R1I9 Gm14523-201ENSMUST00000117260 558 ntBASIC18.02■□□□□ 0.48
Trav2Q5R1I9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav2Q5R1I9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trav2Q5R1I9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav2Q5R1I9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav2Q5R1I9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18■□□□□ 0.47
Trav2Q5R1I9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18■□□□□ 0.47
Trav2Q5R1I9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav2Q5R1I9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trav2Q5R1I9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav2Q5R1I9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav2Q5R1I9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav2Q5R1I9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav2Q5R1I9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Trav2Q5R1I9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.99■□□□□ 0.47
Trav2Q5R1I9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav2Q5R1I9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav2Q5R1I9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav2Q5R1I9 Gm44428-201ENSMUST00000204474 874 ntBASIC17.97■□□□□ 0.47
Trav2Q5R1I9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav2Q5R1I9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav2Q5R1I9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav2Q5R1I9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav2Q5R1I9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav2Q5R1I9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav2Q5R1I9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav2Q5R1I9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav2Q5R1I9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.94■□□□□ 0.46
Trav2Q5R1I9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.94■□□□□ 0.46
Trav2Q5R1I9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav2Q5R1I9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav2Q5R1I9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav2Q5R1I9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.93■□□□□ 0.46
Trav2Q5R1I9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav2Q5R1I9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav2Q5R1I9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav2Q5R1I9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav2Q5R1I9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav2Q5R1I9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav2Q5R1I9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav2Q5R1I9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav2Q5R1I9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav2Q5R1I9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.92■□□□□ 0.46
Trav2Q5R1I9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav2Q5R1I9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav2Q5R1I9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav2Q5R1I9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms