Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp25Q3U435 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp25Q3U435 Gm11687-201ENSMUST00000118911 886 ntBASIC21.47■■□□□ 1.03
Mmp25Q3U435 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
Mmp25Q3U435 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Mmp25Q3U435 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Mmp25Q3U435 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mmp25Q3U435 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Mmp25Q3U435 Gm16437-201ENSMUST00000025669 507 ntBASIC21.46■■□□□ 1.03
Mmp25Q3U435 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mmp25Q3U435 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Mmp25Q3U435 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.45■■□□□ 1.02
Mmp25Q3U435 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp25Q3U435 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp25Q3U435 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp25Q3U435 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp25Q3U435 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp25Q3U435 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp25Q3U435 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.44■■□□□ 1.02
Mmp25Q3U435 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp25Q3U435 Mir6538-201ENSMUST00000183713 110 ntBASIC21.44■■□□□ 1.02
Mmp25Q3U435 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp25Q3U435 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp25Q3U435 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp25Q3U435 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp25Q3U435 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Mmp25Q3U435 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.43■■□□□ 1.02
Mmp25Q3U435 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp25Q3U435 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.42■■□□□ 1.02
Mmp25Q3U435 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mmp25Q3U435 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Mmp25Q3U435 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp25Q3U435 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp25Q3U435 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Mmp25Q3U435 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp25Q3U435 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Mmp25Q3U435 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.4■■□□□ 1.02
Mmp25Q3U435 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp25Q3U435 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp25Q3U435 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp25Q3U435 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp25Q3U435 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp25Q3U435 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Mmp25Q3U435 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mmp25Q3U435 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Mmp25Q3U435 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mmp25Q3U435 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Mmp25Q3U435 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.38■■□□□ 1.01
Mmp25Q3U435 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp25Q3U435 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp25Q3U435 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Mmp25Q3U435 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Mmp25Q3U435 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.38■■□□□ 1.01
Mmp25Q3U435 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.37■■□□□ 1.01
Mmp25Q3U435 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp25Q3U435 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp25Q3U435 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp25Q3U435 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Mmp25Q3U435 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp25Q3U435 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Mmp25Q3U435 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mmp25Q3U435 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mmp25Q3U435 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp25Q3U435 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Mmp25Q3U435 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp25Q3U435 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.34■■□□□ 1.01
Mmp25Q3U435 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.34■■□□□ 1.01
Mmp25Q3U435 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp25Q3U435 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp25Q3U435 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp25Q3U435 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp25Q3U435 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Mmp25Q3U435 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp25Q3U435 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.32■■□□□ 1
Mmp25Q3U435 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp25Q3U435 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp25Q3U435 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp25Q3U435 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp25Q3U435 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp25Q3U435 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp25Q3U435 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.3■■□□□ 1
Mmp25Q3U435 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.3■■□□□ 1
Mmp25Q3U435 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp25Q3U435 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp25Q3U435 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Mmp25Q3U435 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp25Q3U435 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.28■■□□□ 1
Mmp25Q3U435 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp25Q3U435 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp25Q3U435 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mmp25Q3U435 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp25Q3U435 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.26■□□□□ 0.99
Mmp25Q3U435 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Mmp25Q3U435 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.26■□□□□ 0.99
Mmp25Q3U435 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp25Q3U435 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.26■□□□□ 0.99
Mmp25Q3U435 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp25Q3U435 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.25■□□□□ 0.99
Mmp25Q3U435 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp25Q3U435 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms