Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.39■■□□□ 1.17
Limk1P53668 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Limk1P53668 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Limk1P53668 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Limk1P53668 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.38■■□□□ 1.17
Limk1P53668 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Limk1P53668 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Limk1P53668 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Limk1P53668 Gm43566-201ENSMUST00000196851 808 ntBASIC22.37■■□□□ 1.17
Limk1P53668 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.37■■□□□ 1.17
Limk1P53668 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Limk1P53668 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Limk1P53668 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.36■■□□□ 1.17
Limk1P53668 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Limk1P53668 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Limk1P53668 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Limk1P53668 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Limk1P53668 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.35■■□□□ 1.17
Limk1P53668 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Limk1P53668 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Limk1P53668 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Limk1P53668 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.34■■□□□ 1.17
Limk1P53668 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Limk1P53668 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Limk1P53668 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Limk1P53668 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Limk1P53668 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Limk1P53668 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
Limk1P53668 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Limk1P53668 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.33■■□□□ 1.17
Limk1P53668 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Limk1P53668 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.33■■□□□ 1.17
Limk1P53668 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.33■■□□□ 1.17
Limk1P53668 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Limk1P53668 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.33■■□□□ 1.17
Limk1P53668 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Limk1P53668 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.32■■□□□ 1.16
Limk1P53668 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.32■■□□□ 1.16
Limk1P53668 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Limk1P53668 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Limk1P53668 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Limk1P53668 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Limk1P53668 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Limk1P53668 Terc-201ENSMUST00000082862 423 ntBASIC22.3■■□□□ 1.16
Limk1P53668 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Limk1P53668 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Limk1P53668 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Limk1P53668 Gm14117-201ENSMUST00000122417 843 ntBASIC22.29■■□□□ 1.16
Limk1P53668 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Limk1P53668 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Limk1P53668 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Limk1P53668 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.28■■□□□ 1.16
Limk1P53668 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Limk1P53668 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Limk1P53668 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Limk1P53668 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Limk1P53668 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.27■■□□□ 1.16
Limk1P53668 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Limk1P53668 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Limk1P53668 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Limk1P53668 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Limk1P53668 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.26■■□□□ 1.15
Limk1P53668 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Limk1P53668 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Limk1P53668 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Limk1P53668 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Limk1P53668 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Limk1P53668 Gm13238-201ENSMUST00000117655 780 ntBASIC22.25■■□□□ 1.15
Limk1P53668 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Limk1P53668 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Limk1P53668 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Limk1P53668 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Limk1P53668 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.24■■□□□ 1.15
Limk1P53668 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.24■■□□□ 1.15
Limk1P53668 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Limk1P53668 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Limk1P53668 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Limk1P53668 Gm45444-201ENSMUST00000211394 898 ntBASIC22.23■■□□□ 1.15
Limk1P53668 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.23■■□□□ 1.15
Limk1P53668 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Limk1P53668 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Limk1P53668 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Limk1P53668 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Limk1P53668 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.22■■□□□ 1.15
Limk1P53668 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.22■■□□□ 1.15
Limk1P53668 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.22■■□□□ 1.15
Limk1P53668 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Limk1P53668 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Limk1P53668 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.21■■□□□ 1.15
Limk1P53668 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Limk1P53668 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.21■■□□□ 1.15
Limk1P53668 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Limk1P53668 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Limk1P53668 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Limk1P53668 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Limk1P53668 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Limk1P53668 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Limk1P53668 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.19■■□□□ 1.14
Limk1P53668 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Limk1P53668 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms