Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.59■□□□□ 0.57
Rab5cP35278 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab5cP35278 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab5cP35278 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab5cP35278 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab5cP35278 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Rab5cP35278 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab5cP35278 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab5cP35278 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rab5cP35278 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rab5cP35278 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rab5cP35278 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab5cP35278 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.57■□□□□ 0.56
Rab5cP35278 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.56■□□□□ 0.56
Rab5cP35278 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab5cP35278 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab5cP35278 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab5cP35278 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rab5cP35278 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab5cP35278 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rab5cP35278 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab5cP35278 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab5cP35278 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab5cP35278 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab5cP35278 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab5cP35278 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab5cP35278 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab5cP35278 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab5cP35278 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab5cP35278 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab5cP35278 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rab5cP35278 Gm27322-201ENSMUST00000184007 104 ntBASIC18.54■□□□□ 0.56
Rab5cP35278 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Rab5cP35278 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab5cP35278 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab5cP35278 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab5cP35278 Peli2-204ENSMUST00000226513 1320 ntBASIC18.53■□□□□ 0.56
Rab5cP35278 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rab5cP35278 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rab5cP35278 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rab5cP35278 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rab5cP35278 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Rab5cP35278 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab5cP35278 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rab5cP35278 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rab5cP35278 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab5cP35278 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Rab5cP35278 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rab5cP35278 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab5cP35278 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab5cP35278 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab5cP35278 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Rab5cP35278 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab5cP35278 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab5cP35278 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab5cP35278 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.48■□□□□ 0.55
Rab5cP35278 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Rab5cP35278 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rab5cP35278 Notumos-201ENSMUST00000151998 2659 ntBASIC18.48■□□□□ 0.55
Rab5cP35278 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab5cP35278 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab5cP35278 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rab5cP35278 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.47■□□□□ 0.55
Rab5cP35278 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab5cP35278 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab5cP35278 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab5cP35278 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Rab5cP35278 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab5cP35278 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rab5cP35278 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab5cP35278 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab5cP35278 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rab5cP35278 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.46■□□□□ 0.55
Rab5cP35278 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab5cP35278 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.45■□□□□ 0.54
Rab5cP35278 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab5cP35278 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rab5cP35278 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Rab5cP35278 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab5cP35278 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab5cP35278 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rab5cP35278 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab5cP35278 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab5cP35278 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab5cP35278 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab5cP35278 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab5cP35278 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab5cP35278 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.43■□□□□ 0.54
Rab5cP35278 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rab5cP35278 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms