Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Rom1P32958 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rom1P32958 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rom1P32958 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rom1P32958 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rom1P32958 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rom1P32958 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18■□□□□ 0.47
Rom1P32958 AC157572.2-201ENSMUST00000226970 908 ntBASIC18■□□□□ 0.47
Rom1P32958 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Rom1P32958 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Rom1P32958 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rom1P32958 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rom1P32958 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rom1P32958 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rom1P32958 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rom1P32958 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rom1P32958 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.98■□□□□ 0.47
Rom1P32958 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rom1P32958 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rom1P32958 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Rom1P32958 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.98■□□□□ 0.47
Rom1P32958 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.98■□□□□ 0.47
Rom1P32958 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rom1P32958 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rom1P32958 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rom1P32958 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rom1P32958 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rom1P32958 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rom1P32958 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.96■□□□□ 0.47
Rom1P32958 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rom1P32958 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
Rom1P32958 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rom1P32958 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rom1P32958 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.95■□□□□ 0.46
Rom1P32958 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rom1P32958 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Rom1P32958 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rom1P32958 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rom1P32958 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rom1P32958 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rom1P32958 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rom1P32958 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rom1P32958 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rom1P32958 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.93■□□□□ 0.46
Rom1P32958 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rom1P32958 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Rom1P32958 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rom1P32958 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Gm30023-201ENSMUST00000197970 889 ntBASIC17.92■□□□□ 0.46
Rom1P32958 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rom1P32958 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rom1P32958 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rom1P32958 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Rom1P32958 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.91■□□□□ 0.46
Rom1P32958 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rom1P32958 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rom1P32958 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rom1P32958 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rom1P32958 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rom1P32958 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rom1P32958 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Rom1P32958 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rom1P32958 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rom1P32958 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rom1P32958 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Rom1P32958 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rom1P32958 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.89■□□□□ 0.45
Rom1P32958 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rom1P32958 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rom1P32958 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rom1P32958 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rom1P32958 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.87■□□□□ 0.45
Rom1P32958 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rom1P32958 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rom1P32958 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms