Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.09■□□□□ 0.65
Col8a2P25318 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col8a2P25318 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.08■□□□□ 0.65
Col8a2P25318 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col8a2P25318 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col8a2P25318 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col8a2P25318 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col8a2P25318 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col8a2P25318 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col8a2P25318 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col8a2P25318 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.07■□□□□ 0.64
Col8a2P25318 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col8a2P25318 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col8a2P25318 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col8a2P25318 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col8a2P25318 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.07■□□□□ 0.64
Col8a2P25318 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col8a2P25318 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Col8a2P25318 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.06■□□□□ 0.64
Col8a2P25318 Gm12366-201ENSMUST00000121722 873 ntBASIC19.06■□□□□ 0.64
Col8a2P25318 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.06■□□□□ 0.64
Col8a2P25318 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.06■□□□□ 0.64
Col8a2P25318 Gm5786-201ENSMUST00000085368 882 ntBASIC19.06■□□□□ 0.64
Col8a2P25318 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.05■□□□□ 0.64
Col8a2P25318 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Col8a2P25318 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Col8a2P25318 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col8a2P25318 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col8a2P25318 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.05■□□□□ 0.64
Col8a2P25318 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col8a2P25318 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col8a2P25318 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col8a2P25318 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col8a2P25318 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col8a2P25318 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col8a2P25318 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col8a2P25318 Terc-201ENSMUST00000082862 423 ntBASIC19.04■□□□□ 0.64
Col8a2P25318 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col8a2P25318 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Col8a2P25318 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.03■□□□□ 0.64
Col8a2P25318 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col8a2P25318 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Col8a2P25318 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Col8a2P25318 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Col8a2P25318 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col8a2P25318 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.02■□□□□ 0.64
Col8a2P25318 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col8a2P25318 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
Col8a2P25318 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col8a2P25318 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col8a2P25318 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col8a2P25318 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col8a2P25318 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col8a2P25318 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Col8a2P25318 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col8a2P25318 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col8a2P25318 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19■□□□□ 0.63
Col8a2P25318 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col8a2P25318 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col8a2P25318 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col8a2P25318 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col8a2P25318 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col8a2P25318 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col8a2P25318 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col8a2P25318 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col8a2P25318 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col8a2P25318 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col8a2P25318 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col8a2P25318 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col8a2P25318 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.98■□□□□ 0.63
Col8a2P25318 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col8a2P25318 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.98■□□□□ 0.63
Col8a2P25318 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col8a2P25318 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col8a2P25318 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col8a2P25318 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col8a2P25318 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.97■□□□□ 0.63
Col8a2P25318 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col8a2P25318 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.97■□□□□ 0.63
Col8a2P25318 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col8a2P25318 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col8a2P25318 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col8a2P25318 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.97■□□□□ 0.63
Col8a2P25318 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col8a2P25318 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.96■□□□□ 0.63
Col8a2P25318 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col8a2P25318 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col8a2P25318 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col8a2P25318 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.95■□□□□ 0.62
Col8a2P25318 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms