Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn1P18608 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Hmgn1P18608 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn1P18608 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn1P18608 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Hmgn1P18608 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn1P18608 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hmgn1P18608 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn1P18608 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Hmgn1P18608 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hmgn1P18608 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgn1P18608 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgn1P18608 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Hmgn1P18608 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgn1P18608 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn1P18608 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn1P18608 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn1P18608 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn1P18608 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn1P18608 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn1P18608 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.78■□□□□ 0.92
Hmgn1P18608 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn1P18608 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn1P18608 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn1P18608 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgn1P18608 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgn1P18608 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgn1P18608 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgn1P18608 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hmgn1P18608 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Hmgn1P18608 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn1P18608 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn1P18608 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn1P18608 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn1P18608 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.75■□□□□ 0.91
Hmgn1P18608 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hmgn1P18608 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn1P18608 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Hmgn1P18608 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn1P18608 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hmgn1P18608 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgn1P18608 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgn1P18608 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn1P18608 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn1P18608 Gm45855-201ENSMUST00000212546 880 ntBASIC20.73■□□□□ 0.91
Hmgn1P18608 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn1P18608 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Hmgn1P18608 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn1P18608 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn1P18608 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn1P18608 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn1P18608 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn1P18608 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn1P18608 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn1P18608 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn1P18608 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn1P18608 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn1P18608 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.71■□□□□ 0.91
Hmgn1P18608 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn1P18608 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn1P18608 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hmgn1P18608 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn1P18608 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn1P18608 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.7■□□□□ 0.9
Hmgn1P18608 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn1P18608 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn1P18608 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.7■□□□□ 0.9
Hmgn1P18608 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn1P18608 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn1P18608 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn1P18608 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn1P18608 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hmgn1P18608 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn1P18608 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hmgn1P18608 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.68■□□□□ 0.9
Hmgn1P18608 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgn1P18608 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hmgn1P18608 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn1P18608 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn1P18608 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn1P18608 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Hmgn1P18608 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hmgn1P18608 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn1P18608 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hmgn1P18608 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn1P18608 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hmgn1P18608 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hmgn1P18608 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn1P18608 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn1P18608 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Hmgn1P18608 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn1P18608 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn1P18608 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn1P18608 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Hmgn1P18608 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn1P18608 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn1P18608 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn1P18608 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmgn1P18608 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.64■□□□□ 0.9
Hmgn1P18608 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms