Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm2O35900 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.41■□□□□ 0.86
Lsm2O35900 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.41■□□□□ 0.86
Lsm2O35900 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm2O35900 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm2O35900 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm2O35900 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm2O35900 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm2O35900 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm2O35900 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Lsm2O35900 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lsm2O35900 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm2O35900 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Lsm2O35900 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm2O35900 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Lsm2O35900 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm2O35900 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.38■□□□□ 0.85
Lsm2O35900 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm2O35900 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm2O35900 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm2O35900 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm2O35900 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm2O35900 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Lsm2O35900 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm2O35900 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm2O35900 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Lsm2O35900 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm2O35900 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm2O35900 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm2O35900 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm2O35900 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm2O35900 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm2O35900 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm2O35900 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.34■□□□□ 0.85
Lsm2O35900 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm2O35900 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lsm2O35900 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Lsm2O35900 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Lsm2O35900 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Lsm2O35900 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm2O35900 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Lsm2O35900 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm2O35900 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm2O35900 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm2O35900 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.32■□□□□ 0.84
Lsm2O35900 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm2O35900 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm2O35900 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Lsm2O35900 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Lsm2O35900 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm2O35900 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.31■□□□□ 0.84
Lsm2O35900 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.31■□□□□ 0.84
Lsm2O35900 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm2O35900 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm2O35900 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm2O35900 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm2O35900 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm2O35900 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm2O35900 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.27■□□□□ 0.84
Lsm2O35900 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.27■□□□□ 0.84
Lsm2O35900 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.27■□□□□ 0.84
Lsm2O35900 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm2O35900 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lsm2O35900 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Lsm2O35900 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm2O35900 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm2O35900 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.26■□□□□ 0.83
Lsm2O35900 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm2O35900 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm2O35900 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm2O35900 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm2O35900 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm2O35900 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.25■□□□□ 0.83
Lsm2O35900 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm2O35900 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm2O35900 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.25■□□□□ 0.83
Lsm2O35900 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.25■□□□□ 0.83
Lsm2O35900 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm2O35900 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm2O35900 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.24■□□□□ 0.83
Lsm2O35900 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm2O35900 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lsm2O35900 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm2O35900 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm2O35900 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.23■□□□□ 0.83
Lsm2O35900 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm2O35900 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm2O35900 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm2O35900 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm2O35900 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lsm2O35900 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm2O35900 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm2O35900 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm2O35900 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm2O35900 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm2O35900 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm2O35900 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Lsm2O35900 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.21■□□□□ 0.83
Lsm2O35900 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm2O35900 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms