Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Ndufa1O35683 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ndufa1O35683 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ndufa1O35683 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndufa1O35683 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndufa1O35683 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndufa1O35683 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ndufa1O35683 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ndufa1O35683 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufa1O35683 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufa1O35683 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ndufa1O35683 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.24■□□□□ 0.19
Ndufa1O35683 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.24■□□□□ 0.19
Ndufa1O35683 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufa1O35683 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa1O35683 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa1O35683 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa1O35683 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa1O35683 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa1O35683 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa1O35683 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa1O35683 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.22■□□□□ 0.19
Ndufa1O35683 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ndufa1O35683 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ndufa1O35683 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufa1O35683 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufa1O35683 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ndufa1O35683 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndufa1O35683 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufa1O35683 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufa1O35683 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufa1O35683 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufa1O35683 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufa1O35683 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Ndufa1O35683 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.2■□□□□ 0.18
Ndufa1O35683 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa1O35683 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa1O35683 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ndufa1O35683 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa1O35683 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.19■□□□□ 0.18
Ndufa1O35683 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.19■□□□□ 0.18
Ndufa1O35683 Zfp131-205ENSMUST00000223812 663 ntBASIC16.19■□□□□ 0.18
Ndufa1O35683 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa1O35683 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa1O35683 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ndufa1O35683 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa1O35683 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa1O35683 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa1O35683 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.18■□□□□ 0.18
Ndufa1O35683 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa1O35683 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufa1O35683 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufa1O35683 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ndufa1O35683 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.17■□□□□ 0.18
Ndufa1O35683 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufa1O35683 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ndufa1O35683 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufa1O35683 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ndufa1O35683 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufa1O35683 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.15■□□□□ 0.18
Ndufa1O35683 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufa1O35683 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufa1O35683 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufa1O35683 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufa1O35683 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufa1O35683 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufa1O35683 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufa1O35683 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.14■□□□□ 0.17
Ndufa1O35683 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufa1O35683 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ndufa1O35683 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Ndufa1O35683 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ndufa1O35683 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufa1O35683 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Ndufa1O35683 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.13■□□□□ 0.17
Ndufa1O35683 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufa1O35683 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufa1O35683 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufa1O35683 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Ndufa1O35683 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufa1O35683 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa1O35683 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa1O35683 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa1O35683 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ndufa1O35683 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.12■□□□□ 0.17
Ndufa1O35683 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa1O35683 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa1O35683 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa1O35683 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.11■□□□□ 0.17
Ndufa1O35683 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufa1O35683 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufa1O35683 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufa1O35683 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufa1O35683 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.1■□□□□ 0.17
Ndufa1O35683 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.1■□□□□ 0.17
Ndufa1O35683 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufa1O35683 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.1■□□□□ 0.17
Ndufa1O35683 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufa1O35683 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufa1O35683 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms