Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfsf11O35235 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tnfsf11O35235 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tnfsf11O35235 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfsf11O35235 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfsf11O35235 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.42
Tnfsf11O35235 Particl-201ENSMUST00000205370 1560 ntBASIC17.7■□□□□ 0.42
Tnfsf11O35235 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf11O35235 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf11O35235 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Tnfsf11O35235 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfsf11O35235 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tnfsf11O35235 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfsf11O35235 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfsf11O35235 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfsf11O35235 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnfsf11O35235 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfsf11O35235 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnfsf11O35235 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfsf11O35235 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfsf11O35235 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfsf11O35235 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfsf11O35235 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tnfsf11O35235 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfsf11O35235 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfsf11O35235 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfsf11O35235 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.67■□□□□ 0.42
Tnfsf11O35235 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfsf11O35235 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfsf11O35235 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfsf11O35235 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfsf11O35235 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.66■□□□□ 0.42
Tnfsf11O35235 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfsf11O35235 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfsf11O35235 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfsf11O35235 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfsf11O35235 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfsf11O35235 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfsf11O35235 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfsf11O35235 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tnfsf11O35235 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfsf11O35235 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfsf11O35235 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfsf11O35235 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfsf11O35235 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tnfsf11O35235 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfsf11O35235 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.64■□□□□ 0.41
Tnfsf11O35235 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfsf11O35235 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfsf11O35235 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Tnfsf11O35235 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfsf11O35235 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.64■□□□□ 0.41
Tnfsf11O35235 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfsf11O35235 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfsf11O35235 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfsf11O35235 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.64■□□□□ 0.41
Tnfsf11O35235 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfsf11O35235 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfsf11O35235 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfsf11O35235 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.63■□□□□ 0.41
Tnfsf11O35235 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfsf11O35235 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfsf11O35235 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.62■□□□□ 0.41
Tnfsf11O35235 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfsf11O35235 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfsf11O35235 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfsf11O35235 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.62■□□□□ 0.41
Tnfsf11O35235 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfsf11O35235 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfsf11O35235 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfsf11O35235 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.61■□□□□ 0.41
Tnfsf11O35235 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfsf11O35235 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfsf11O35235 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Tnfsf11O35235 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfsf11O35235 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf11O35235 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf11O35235 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf11O35235 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf11O35235 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf11O35235 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf11O35235 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.6■□□□□ 0.41
Tnfsf11O35235 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf11O35235 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfsf11O35235 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfsf11O35235 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfsf11O35235 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Tnfsf11O35235 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tnfsf11O35235 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfsf11O35235 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Tnfsf11O35235 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf11O35235 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf11O35235 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf11O35235 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf11O35235 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf11O35235 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf11O35235 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf11O35235 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf11O35235 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf11O35235 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms