Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trav6-5A0A075B6B5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-5A0A075B6B5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.68■□□□□ 0.42
Trav6-5A0A075B6B5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-5A0A075B6B5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-5A0A075B6B5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav6-5A0A075B6B5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-5A0A075B6B5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-5A0A075B6B5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-5A0A075B6B5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-5A0A075B6B5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav6-5A0A075B6B5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-5A0A075B6B5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-5A0A075B6B5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-5A0A075B6B5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-5A0A075B6B5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-5A0A075B6B5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-5A0A075B6B5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-5A0A075B6B5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-5A0A075B6B5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-5A0A075B6B5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-5A0A075B6B5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-5A0A075B6B5 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.64■□□□□ 0.42
Trav6-5A0A075B6B5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-5A0A075B6B5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-5A0A075B6B5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-5A0A075B6B5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-5A0A075B6B5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-5A0A075B6B5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-5A0A075B6B5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-5A0A075B6B5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-5A0A075B6B5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-5A0A075B6B5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-5A0A075B6B5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav6-5A0A075B6B5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-5A0A075B6B5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-5A0A075B6B5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-5A0A075B6B5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.61■□□□□ 0.41
Trav6-5A0A075B6B5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-5A0A075B6B5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-5A0A075B6B5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-5A0A075B6B5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-5A0A075B6B5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-5A0A075B6B5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-5A0A075B6B5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-5A0A075B6B5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-5A0A075B6B5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav6-5A0A075B6B5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6-5A0A075B6B5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-5A0A075B6B5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-5A0A075B6B5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-5A0A075B6B5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-5A0A075B6B5 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.57■□□□□ 0.4
Trav6-5A0A075B6B5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-5A0A075B6B5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav6-5A0A075B6B5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-5A0A075B6B5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-5A0A075B6B5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-5A0A075B6B5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-5A0A075B6B5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-5A0A075B6B5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-5A0A075B6B5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trav6-5A0A075B6B5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav6-5A0A075B6B5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-5A0A075B6B5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-5A0A075B6B5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-5A0A075B6B5 Gm16148-201ENSMUST00000119653 893 ntBASIC17.55■□□□□ 0.4
Trav6-5A0A075B6B5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-5A0A075B6B5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-5A0A075B6B5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-5A0A075B6B5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-5A0A075B6B5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.53■□□□□ 0.4
Trav6-5A0A075B6B5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav6-5A0A075B6B5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-5A0A075B6B5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-5A0A075B6B5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav6-5A0A075B6B5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-5A0A075B6B5 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.52■□□□□ 0.4
Trav6-5A0A075B6B5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-5A0A075B6B5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6-5A0A075B6B5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6-5A0A075B6B5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-5A0A075B6B5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav6-5A0A075B6B5 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.51■□□□□ 0.39
Trav6-5A0A075B6B5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-5A0A075B6B5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms