Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6n-7A0A075B6A6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav6n-7A0A075B6A6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trav6n-7A0A075B6A6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6n-7A0A075B6A6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trav6n-7A0A075B6A6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6n-7A0A075B6A6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.27■□□□□ 0.68
Trav6n-7A0A075B6A6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6n-7A0A075B6A6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.27■□□□□ 0.68
Trav6n-7A0A075B6A6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6n-7A0A075B6A6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trav6n-7A0A075B6A6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6n-7A0A075B6A6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav6n-7A0A075B6A6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6n-7A0A075B6A6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trav6n-7A0A075B6A6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6n-7A0A075B6A6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav6n-7A0A075B6A6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6n-7A0A075B6A6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6n-7A0A075B6A6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6n-7A0A075B6A6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6n-7A0A075B6A6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trav6n-7A0A075B6A6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.25■□□□□ 0.67
Trav6n-7A0A075B6A6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6n-7A0A075B6A6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6n-7A0A075B6A6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6n-7A0A075B6A6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6n-7A0A075B6A6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trav6n-7A0A075B6A6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6n-7A0A075B6A6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6n-7A0A075B6A6 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.23■□□□□ 0.67
Trav6n-7A0A075B6A6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6n-7A0A075B6A6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6n-7A0A075B6A6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6n-7A0A075B6A6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Trav6n-7A0A075B6A6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6n-7A0A075B6A6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.22■□□□□ 0.67
Trav6n-7A0A075B6A6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6n-7A0A075B6A6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6n-7A0A075B6A6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6n-7A0A075B6A6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.66
Trav6n-7A0A075B6A6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6n-7A0A075B6A6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6n-7A0A075B6A6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6n-7A0A075B6A6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6n-7A0A075B6A6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6n-7A0A075B6A6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6n-7A0A075B6A6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6n-7A0A075B6A6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.19■□□□□ 0.66
Trav6n-7A0A075B6A6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
Trav6n-7A0A075B6A6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6n-7A0A075B6A6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6n-7A0A075B6A6 Terc-201ENSMUST00000082862 423 ntBASIC19.19■□□□□ 0.66
Trav6n-7A0A075B6A6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6n-7A0A075B6A6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6n-7A0A075B6A6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6n-7A0A075B6A6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6n-7A0A075B6A6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.18■□□□□ 0.66
Trav6n-7A0A075B6A6 Scarna2-201ENSMUST00000157560 414 ntBASIC19.18■□□□□ 0.66
Trav6n-7A0A075B6A6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6n-7A0A075B6A6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6n-7A0A075B6A6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6n-7A0A075B6A6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6n-7A0A075B6A6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trav6n-7A0A075B6A6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.17■□□□□ 0.66
Trav6n-7A0A075B6A6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6n-7A0A075B6A6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6n-7A0A075B6A6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6n-7A0A075B6A6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6n-7A0A075B6A6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6n-7A0A075B6A6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav6n-7A0A075B6A6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav6n-7A0A075B6A6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6n-7A0A075B6A6 Gm9806-201ENSMUST00000051080 552 ntBASIC19.15■□□□□ 0.66
Trav6n-7A0A075B6A6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trav6n-7A0A075B6A6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6n-7A0A075B6A6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6n-7A0A075B6A6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6n-7A0A075B6A6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6n-7A0A075B6A6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6n-7A0A075B6A6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6n-7A0A075B6A6 Gm16437-201ENSMUST00000025669 507 ntBASIC19.14■□□□□ 0.65
Trav6n-7A0A075B6A6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6n-7A0A075B6A6 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.14■□□□□ 0.65
Trav6n-7A0A075B6A6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6n-7A0A075B6A6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6n-7A0A075B6A6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.13■□□□□ 0.65
Trav6n-7A0A075B6A6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6n-7A0A075B6A6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6n-7A0A075B6A6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6n-7A0A075B6A6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6n-7A0A075B6A6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6n-7A0A075B6A6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6n-7A0A075B6A6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Trav6n-7A0A075B6A6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6n-7A0A075B6A6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6n-7A0A075B6A6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6n-7A0A075B6A6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6n-7A0A075B6A6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6n-7A0A075B6A6 Gm11687-201ENSMUST00000118911 886 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms