Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13-1A0A075B644 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav13-1A0A075B644 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13-1A0A075B644 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.02■□□□□ 0.16
Trav13-1A0A075B644 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav13-1A0A075B644 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13-1A0A075B644 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13-1A0A075B644 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13-1A0A075B644 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13-1A0A075B644 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav13-1A0A075B644 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13-1A0A075B644 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-1A0A075B644 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-1A0A075B644 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-1A0A075B644 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-1A0A075B644 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-1A0A075B644 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav13-1A0A075B644 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav13-1A0A075B644 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-1A0A075B644 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-1A0A075B644 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13-1A0A075B644 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13-1A0A075B644 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13-1A0A075B644 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13-1A0A075B644 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13-1A0A075B644 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13-1A0A075B644 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13-1A0A075B644 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13-1A0A075B644 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13-1A0A075B644 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13-1A0A075B644 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13-1A0A075B644 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13-1A0A075B644 Cap2-205ENSMUST00000225824 1634 ntBASIC15.97■□□□□ 0.15
Trav13-1A0A075B644 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13-1A0A075B644 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13-1A0A075B644 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13-1A0A075B644 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav13-1A0A075B644 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav13-1A0A075B644 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13-1A0A075B644 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13-1A0A075B644 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13-1A0A075B644 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav13-1A0A075B644 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.96■□□□□ 0.15
Trav13-1A0A075B644 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.96■□□□□ 0.15
Trav13-1A0A075B644 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.96■□□□□ 0.15
Trav13-1A0A075B644 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav13-1A0A075B644 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13-1A0A075B644 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.95■□□□□ 0.14
Trav13-1A0A075B644 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13-1A0A075B644 Gm9812-201ENSMUST00000061934 968 ntBASIC15.95■□□□□ 0.14
Trav13-1A0A075B644 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav13-1A0A075B644 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13-1A0A075B644 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13-1A0A075B644 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13-1A0A075B644 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav13-1A0A075B644 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13-1A0A075B644 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav13-1A0A075B644 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13-1A0A075B644 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13-1A0A075B644 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.92■□□□□ 0.14
Trav13-1A0A075B644 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav13-1A0A075B644 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13-1A0A075B644 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13-1A0A075B644 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13-1A0A075B644 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13-1A0A075B644 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13-1A0A075B644 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.92■□□□□ 0.14
Trav13-1A0A075B644 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav13-1A0A075B644 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Trav13-1A0A075B644 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav13-1A0A075B644 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13-1A0A075B644 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav13-1A0A075B644 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13-1A0A075B644 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13-1A0A075B644 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13-1A0A075B644 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13-1A0A075B644 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13-1A0A075B644 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.9■□□□□ 0.14
Trav13-1A0A075B644 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13-1A0A075B644 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav13-1A0A075B644 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13-1A0A075B644 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13-1A0A075B644 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13-1A0A075B644 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13-1A0A075B644 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav13-1A0A075B644 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav13-1A0A075B644 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav13-1A0A075B644 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13-1A0A075B644 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-1A0A075B644 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav13-1A0A075B644 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-1A0A075B644 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav13-1A0A075B644 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-1A0A075B644 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-1A0A075B644 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-1A0A075B644 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav13-1A0A075B644 Gm27502-201ENSMUST00000183495 199 ntBASIC15.87■□□□□ 0.13
Trav13-1A0A075B644 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-1A0A075B644 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-1A0A075B644 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms