Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm4899-201ENSMUST00000178708 719 ntBASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm27300-201ENSMUST00000184085 97 ntBASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm27335-201ENSMUST00000184758 97 ntBASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nr1h3Q9Z0Y9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nr1h3Q9Z0Y9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm18489-201ENSMUST00000172565 551 ntBASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nr1h3Q9Z0Y9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms