Protein–RNA interactions for Protein: Q9WTV7

Rlim, E3 ubiquitin-protein ligase RLIM, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RlimQ9WTV7 Mir3081-201ENSMUST00000175305 84 ntBASIC14.17□□□□□ -0.14
RlimQ9WTV7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RlimQ9WTV7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.17□□□□□ -0.14
RlimQ9WTV7 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.17□□□□□ -0.14
RlimQ9WTV7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.17□□□□□ -0.14
RlimQ9WTV7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RlimQ9WTV7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RlimQ9WTV7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.16□□□□□ -0.14
RlimQ9WTV7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Gm27742-201ENSMUST00000184667 60 ntBASIC14.16□□□□□ -0.14
RlimQ9WTV7 Gm44454-201ENSMUST00000198541 138 ntBASIC14.16□□□□□ -0.14
RlimQ9WTV7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.16□□□□□ -0.14
RlimQ9WTV7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 BC037039-201ENSMUST00000192003 2205 ntBASIC14.16□□□□□ -0.14
RlimQ9WTV7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.16□□□□□ -0.14
RlimQ9WTV7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RlimQ9WTV7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm8825-201ENSMUST00000182565 998 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm4518-201ENSMUST00000182638 718 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm7367-201ENSMUST00000057611 492 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.15□□□□□ -0.14
RlimQ9WTV7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RlimQ9WTV7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
RlimQ9WTV7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RlimQ9WTV7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RlimQ9WTV7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms