Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Gm27646-201ENSMUST00000183989 110 ntBASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Col13a1Q9R1N9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col13a1Q9R1N9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col13a1Q9R1N9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col13a1Q9R1N9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col13a1Q9R1N9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col13a1Q9R1N9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col13a1Q9R1N9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col13a1Q9R1N9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Col13a1Q9R1N9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col13a1Q9R1N9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.21□□□□□ -0.3
Col13a1Q9R1N9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Col13a1Q9R1N9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Gm11424-201ENSMUST00000121929 829 ntBASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Mir1895-201ENSMUST00000122615 79 ntBASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Gm27494-201ENSMUST00000184735 189 ntBASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Mir7023-201ENSMUST00000185093 64 ntBASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms