Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn5Q9JL35 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn5Q9JL35 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn5Q9JL35 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Gm16061-201ENSMUST00000122167 857 ntBASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Gm21814-202ENSMUST00000203277 873 ntBASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Gm7213-201ENSMUST00000215977 950 ntBASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn5Q9JL35 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgn5Q9JL35 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgn5Q9JL35 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.52■□□□□ 0.39
Hmgn5Q9JL35 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgn5Q9JL35 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgn5Q9JL35 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn5Q9JL35 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.5■□□□□ 0.39
Hmgn5Q9JL35 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms