Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Gm15165-201ENSMUST00000118140 502 ntBASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nup50Q9JIH2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nup50Q9JIH2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Gm15372-201ENSMUST00000120729 834 ntBASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Gm27357-201ENSMUST00000183754 135 ntBASIC16.42■□□□□ 0.22
Nup50Q9JIH2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.42■□□□□ 0.22
Nup50Q9JIH2 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup50Q9JIH2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Gm25745-201ENSMUST00000174945 133 ntBASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Gm27704-201ENSMUST00000185094 107 ntBASIC16.41■□□□□ 0.22
Nup50Q9JIH2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nup50Q9JIH2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms