Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dap3Q9ER88 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dap3Q9ER88 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dap3Q9ER88 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Dap3Q9ER88 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Dap3Q9ER88 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Dap3Q9ER88 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Dap3Q9ER88 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Dap3Q9ER88 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Dap3Q9ER88 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Dap3Q9ER88 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.32□□□□□ -0.12
Dap3Q9ER88 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Gm11336-201ENSMUST00000118168 334 ntBASIC14.32□□□□□ -0.12
Dap3Q9ER88 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Mir1668-201ENSMUST00000184114 107 ntBASIC14.32□□□□□ -0.12
Dap3Q9ER88 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.32□□□□□ -0.12
Dap3Q9ER88 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Dap3Q9ER88 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Gm13559-201ENSMUST00000120476 863 ntBASIC14.31□□□□□ -0.12
Dap3Q9ER88 Mir5130-201ENSMUST00000175160 84 ntBASIC14.31□□□□□ -0.12
Dap3Q9ER88 Gm29707-201ENSMUST00000196325 491 ntBASIC14.31□□□□□ -0.12
Dap3Q9ER88 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Dap3Q9ER88 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.3□□□□□ -0.12
Dap3Q9ER88 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms