Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a3bpQ9EQG9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Col4a3bpQ9EQG9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Gm27459-201ENSMUST00000184860 107 ntBASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col4a3bpQ9EQG9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Gm44454-201ENSMUST00000198541 138 ntBASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a3bpQ9EQG9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms