Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Gm27000-201ENSMUST00000182943 842 ntBASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmg20aQ9DC33 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Gm12441-201ENSMUST00000121806 588 ntBASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Gm24841-201ENSMUST00000158676 357 ntBASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Gm18666-201ENSMUST00000190039 958 ntBASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Gm43183-201ENSMUST00000200632 547 ntBASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmg20aQ9DC33 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmg20aQ9DC33 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms