Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Gm4899-201ENSMUST00000178708 719 ntBASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph3bQ9DA80 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.03■□□□□ 0.32
Rsph3bQ9DA80 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Gm24513-201ENSMUST00000174964 138 ntBASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Mir3113-201ENSMUST00000175478 76 ntBASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Gm27397-201ENSMUST00000184997 107 ntBASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Gm2756-201ENSMUST00000195851 400 ntBASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Gm9682-201ENSMUST00000197505 556 ntBASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph3bQ9DA80 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph3bQ9DA80 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph3bQ9DA80 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph3bQ9DA80 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.02■□□□□ 0.31
Rsph3bQ9DA80 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph3bQ9DA80 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Gm4995-201ENSMUST00000117247 432 ntBASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Gm14822-201ENSMUST00000122247 291 ntBASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Gm27300-201ENSMUST00000184085 97 ntBASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Gm27335-201ENSMUST00000184758 97 ntBASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph3bQ9DA80 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms