Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Gm5682-201ENSMUST00000173402 505 ntBASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rsph9Q9D9V4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rsph9Q9D9V4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Gm15358-201ENSMUST00000119249 520 ntBASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Gm9727-201ENSMUST00000161387 555 ntBASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rsph9Q9D9V4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Gm11594-201ENSMUST00000122313 162 ntBASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Gm12260-201ENSMUST00000122447 411 ntBASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rsph9Q9D9V4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms