Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mbd3l1Q9D9H3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Gm5408-201ENSMUST00000197998 747 ntBASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mbd3l1Q9D9H3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Gm9988-201ENSMUST00000069786 435 ntBASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Mbd3l1Q9D9H3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mbd3l1Q9D9H3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.46□□□□□ -0.26
Mbd3l1Q9D9H3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
Mbd3l1Q9D9H3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mbd3l1Q9D9H3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Mbd3l1Q9D9H3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mbd3l1Q9D9H3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mbd3l1Q9D9H3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mbd3l1Q9D9H3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mbd3l1Q9D9H3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Nespas-201ENSMUST00000143738 1083 ntBASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Gm6420-201ENSMUST00000193885 723 ntBASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.45□□□□□ -0.26
Mbd3l1Q9D9H3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms