Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4bQ9D8B3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4bQ9D8B3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp4bQ9D8B3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.58■□□□□ 0.73
Chmp4bQ9D8B3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp4bQ9D8B3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp4bQ9D8B3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Ank2-226ENSMUST00000189368 339 ntBASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4bQ9D8B3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Gm21362-201ENSMUST00000194272 928 ntBASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Chmp4bQ9D8B3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4bQ9D8B3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4bQ9D8B3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4bQ9D8B3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4bQ9D8B3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4bQ9D8B3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4bQ9D8B3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms