Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Gm18101-201ENSMUST00000215769 548 ntBASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp5Q9D7S9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Gm7367-201ENSMUST00000057611 492 ntBASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Gm9987-201ENSMUST00000069768 567 ntBASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp5Q9D7S9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp5Q9D7S9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp5Q9D7S9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms