Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Gm12644-201ENSMUST00000119935 606 ntBASIC17.09■□□□□ 0.33
Cfap53Q9D439 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.09■□□□□ 0.33
Cfap53Q9D439 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap53Q9D439 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap53Q9D439 App-207ENSMUST00000227737 2827 ntBASIC17.08■□□□□ 0.33
Cfap53Q9D439 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap53Q9D439 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap53Q9D439 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap53Q9D439 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.08■□□□□ 0.32
Cfap53Q9D439 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.08■□□□□ 0.32
Cfap53Q9D439 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap53Q9D439 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.07■□□□□ 0.32
Cfap53Q9D439 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.07■□□□□ 0.32
Cfap53Q9D439 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.07■□□□□ 0.32
Cfap53Q9D439 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cfap53Q9D439 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap53Q9D439 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.06■□□□□ 0.32
Cfap53Q9D439 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Gm4459-201ENSMUST00000118750 468 ntBASIC17.06■□□□□ 0.32
Cfap53Q9D439 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.06■□□□□ 0.32
Cfap53Q9D439 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.06■□□□□ 0.32
Cfap53Q9D439 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms