Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.52■□□□□ 0.24
Lysmd1Q9D0E3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.52■□□□□ 0.23
Lysmd1Q9D0E3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lysmd1Q9D0E3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.52■□□□□ 0.23
Lysmd1Q9D0E3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Gm15782-201ENSMUST00000121073 445 ntBASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Gm3436-201ENSMUST00000179930 840 ntBASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Gm27572-201ENSMUST00000183702 255 ntBASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Gm19220-201ENSMUST00000222682 803 ntBASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lysmd1Q9D0E3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Gm6257-201ENSMUST00000163864 910 ntBASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd1Q9D0E3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Lysmd1Q9D0E3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Gm21854-201ENSMUST00000179901 471 ntBASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd1Q9D0E3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms