Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Gm12134-201ENSMUST00000122109 520 ntBASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.04■□□□□ 0.16
Ddx47Q9CWX9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx47Q9CWX9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Gm27463-201ENSMUST00000183569 57 ntBASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx47Q9CWX9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx47Q9CWX9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx47Q9CWX9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx47Q9CWX9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx47Q9CWX9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Ddx47Q9CWX9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx47Q9CWX9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.02■□□□□ 0.15
Ddx47Q9CWX9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Ddx47Q9CWX9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx47Q9CWX9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16■□□□□ 0.15
Ddx47Q9CWX9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx47Q9CWX9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx47Q9CWX9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx47Q9CWX9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms